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Cuby comes with a set of scripts helping to prepare calculations and work with the results. !!!geometry_fragmentation Script handling multiple tasks useful when preparing fragmented calculation. More details: [geometry_fragmentation] !!!geometry2xyz Converts a file (xyz, PDB or z-matrix format, recognized by file suffix: .xyz, .pdb, .zmat) to xyz, printed to standard output. Example: {html}<pre>geometry2xyz geom.pdb > geom.xyz</pre>{/html} !!!geometry2pdb Converts a file (xyz, PDB or z-matrix format, recognized by file suffix) to PDB, printed to standard output. Separate molecules in xyz file (detected from connectivity) are converted to numbered residues in PDB. Example: {html}<pre>geometry2pdb geom.xyz > geom.pdb</pre>{/html}
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